WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3A.4.1 Sequence Name  Y47D3A.4.1
Length (nt)  2109   Chromosome Location  III: 11154827-11168817
Chromosome . Primary Identifier  III Chromosome Location . Start  11154827
Chromosome Location . End  11168817 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000519 cku-70 Y47D3A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.4 Y47D3A.4 2040   III: 11154827-11155048

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.4.1 11154827 11168817 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105090   222   III: 11154827-11155048 Caenorhabditis elegans
Exon105091   103   III: 11155102-11155204 Caenorhabditis elegans
Exon105093   185   III: 11158216-11158400 Caenorhabditis elegans
Exon105094   135   III: 11159192-11159326 Caenorhabditis elegans
Exon105095   134   III: 11162061-11162194 Caenorhabditis elegans
Exon105096   185   III: 11162359-11162543 Caenorhabditis elegans
Exon105097   249   III: 11164123-11164371 Caenorhabditis elegans
Exon105098   170   III: 11164850-11165019 Caenorhabditis elegans
Exon105099   304   III: 11165569-11165872 Caenorhabditis elegans
Exon105100   203   III: 11167236-11167438 Caenorhabditis elegans
Exon105101   219   III: 11168599-11168817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.4.1 11154827 11168817 1

1 Sequence

Length
2109

1 Sequence Ontology Term

Identifier Name Description
transcript