WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3A.12.1 Sequence Name  Y47D3A.12.1
Length (nt)  1025   Chromosome Location  III: 11224808-11227125
Chromosome . Primary Identifier  III Chromosome Location . Start  11224808
Chromosome Location . End  11227125 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006556 tbx-37 Y47D3A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.12 Y47D3A.12 942   III: 11224884-11225300

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.12.1 11224808 11227125 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105152   493   III: 11224808-11225300 Caenorhabditis elegans
Exon105153   319   III: 11225706-11226024 Caenorhabditis elegans
Exon105154   213   III: 11226913-11227125 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.12.1 11224808 11227125 -1

1 Sequence

Length
1025

1 Sequence Ontology Term

Identifier Name Description
transcript