WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3A.30a.1 Sequence Name  Y47D3A.30a.1
Length (nt)  952   Chromosome Location  III: 11230377-11232069
Chromosome . Primary Identifier  III Chromosome Location . Start  11230377
Chromosome Location . End  11232069 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.30a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001246 elo-8 Y47D3A.30 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.30a Y47D3A.30a 879   III: 11230418-11230705

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.30a.1 11230377 11232069 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105155   329   III: 11230377-11230705 Caenorhabditis elegans
Exon105158   335   III: 11230812-11231146 Caenorhabditis elegans
Exon105159   119   III: 11231665-11231783 Caenorhabditis elegans
Exon105160   134   III: 11231836-11231969 Caenorhabditis elegans
Exon105161   35   III: 11232035-11232069 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.30a.1 11230377 11232069 -1

1 Sequence

Length
952

1 Sequence Ontology Term

Identifier Name Description
transcript