WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3A.14.1 Sequence Name  Y47D3A.14.1
Length (nt)  905   Chromosome Location  III: 11235581-11236868
Chromosome . Primary Identifier  III Chromosome Location . Start  11235581
Chromosome Location . End  11236868 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012927 Y47D3A.14 Y47D3A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.14 Y47D3A.14 864   III: 11235609-11235736

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.14.1 11235581 11236868 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105169   156   III: 11235581-11235736 Caenorhabditis elegans
Exon105170   229   III: 11235906-11236134 Caenorhabditis elegans
Exon105171   201   III: 11236181-11236381 Caenorhabditis elegans
Exon105172   153   III: 11236430-11236582 Caenorhabditis elegans
Exon105173   103   III: 11236634-11236736 Caenorhabditis elegans
Exon105174   63   III: 11236806-11236868 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.14.1 11235581 11236868 -1

1 Sequence

Length
905

1 Sequence Ontology Term

Identifier Name Description
transcript