WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3A.15.1 Sequence Name  Y47D3A.15.1
Length (nt)  1950   Chromosome Location  III: 11237143-11239204
Chromosome . Primary Identifier  III Chromosome Location . Start  11237143
Chromosome Location . End  11239204 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012928 aakb-2 Y47D3A.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.15 Y47D3A.15 825   III: 11237151-11237303

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.15.1 11237143 11239204 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105224   161   III: 11237143-11237303 Caenorhabditis elegans
Exon105225   395   III: 11237365-11237759 Caenorhabditis elegans
Exon105226   1394   III: 11237811-11239204 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.15.1 11237143 11239204 1

1 Sequence

Length
1950

1 Sequence Ontology Term

Identifier Name Description
transcript