WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3A.20.1 Sequence Name  Y47D3A.20.1
Length (nt)  354   Chromosome Location  III: 11275066-11276032
Chromosome . Primary Identifier  III Chromosome Location . Start  11275066
Chromosome Location . End  11276032 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.20.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012931 Y47D3A.20 Y47D3A.20 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.20 Y47D3A.20 216   III: 11275092-11275104

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.20.1 11275066 11276032 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105313   39   III: 11275066-11275104 Caenorhabditis elegans
Exon105314   81   III: 11275178-11275258 Caenorhabditis elegans
Exon105315   234   III: 11275799-11276032 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.20.1 11275066 11276032 1

1 Sequence

Length
354

1 Sequence Ontology Term

Identifier Name Description
transcript