WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3A.22.1 Sequence Name  Y47D3A.22.1
Length (nt)  2495   Chromosome Location  III: 11286335-11290676
Chromosome . Primary Identifier  III Chromosome Location . Start  11286335
Chromosome Location . End  11290676 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.22.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012933 mib-1 Y47D3A.22 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.22 Y47D3A.22 2298   III: 11286421-11286531

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.22.1 11286335 11290676 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105335   197   III: 11286335-11286531 Caenorhabditis elegans
Exon105336   224   III: 11286597-11286820 Caenorhabditis elegans
Exon105337   209   III: 11286972-11287180 Caenorhabditis elegans
Exon105338   87   III: 11287369-11287455 Caenorhabditis elegans
Exon105339   356   III: 11287641-11287996 Caenorhabditis elegans
Exon105340   124   III: 11288190-11288313 Caenorhabditis elegans
Exon105341   107   III: 11288359-11288465 Caenorhabditis elegans
Exon105342   223   III: 11288529-11288751 Caenorhabditis elegans
Exon105343   263   III: 11288812-11289074 Caenorhabditis elegans
Exon105344   345   III: 11289492-11289836 Caenorhabditis elegans
Exon105345   96   III: 11290230-11290325 Caenorhabditis elegans
Exon105347   264   III: 11290413-11290676 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.22.1 11286335 11290676 -1

1 Sequence

Length
2495

1 Sequence Ontology Term

Identifier Name Description
transcript