WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47D3A.25 Sequence Name  Y47D3A.25
Length (nt)  630   Chromosome Location  III: 11306877-11307023
Chromosome . Primary Identifier  III Chromosome Location . Start  11306877
Chromosome Location . End  11307023
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.25

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24336 RAB-35 23.4 209 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00101868
WBRNAi00107755
WBRNAi00056750
WBRNAi00006863
WBRNAi00056748
WBRNAi00056749
WBRNAi00083373
WBRNAi00033542
WBRNAi00091938
WBRNAi00117429

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47D3A.25 11306877 11307023 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004284 rab-35 Y47D3A.25 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47D3A.25 11306877 11307023 -1
CDS:Y47D3A.25 11308570 11308694 -1
CDS:Y47D3A.25 11309902 11310026 -1
CDS:Y47D3A.25 11310540 11310663 -1
CDS:Y47D3A.25 11311438 11311546 -1

1 Sequence

Length
630

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47D3A.25.1 Y47D3A.25.1 880   III: 11306647-11311566