WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47D3A.26c Sequence Name  Y47D3A.26c
Length (nt)  990   Chromosome Location  III: 11300791-11301000
Chromosome . Primary Identifier  III Chromosome Location . Start  11300791
Chromosome Location . End  11301000
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.26c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47674 SMC-3, isoform c 38.1 329 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00026718
WBRNAi00071365
WBRNAi00009340
WBRNAi00037161
WBRNAi00001943
WBRNAi00001242
WBRNAi00088415
WBRNAi00056750
WBRNAi00006863

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47D3A.26c 11300791 11301000 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004873 smc-3 Y47D3A.26 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47D3A.26c 11300791 11301000 1
CDS:Y47D3A.26c 11302716 11302925 1
CDS:Y47D3A.26c 11303375 11303489 1
CDS:Y47D3A.26c 11304649 11304845 1
CDS:Y47D3A.26c 11305235 11305313 1
CDS:Y47D3A.26c 11305722 11305900 1

1 Sequence

Length
990

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47D3A.26c.1 Y47D3A.26c.1 990   III: 11300791-11305900