WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28D6.3.1 Sequence Name  T28D6.3.1
Length (nt)  472   Chromosome Location  III: 11366767-11368435
Chromosome . Primary Identifier  III Chromosome Location . Start  11366767
Chromosome Location . End  11368435 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28D6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012123 pugs-8 T28D6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28D6.3 T28D6.3 363   III: 11366790-11366873

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28D6.3.1 11366767 11368435 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105513   107   III: 11366767-11366873 Caenorhabditis elegans
Exon105514   213   III: 11368019-11368231 Caenorhabditis elegans
Exon105515   152   III: 11368284-11368435 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28D6.3.1 11366767 11368435 1

1 Sequence

Length
472

1 Sequence Ontology Term

Identifier Name Description
transcript