WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28D6.2.1 Sequence Name  T28D6.2.1
Length (nt)  1431   Chromosome Location  III: 11368351-11371788
Chromosome . Primary Identifier  III Chromosome Location . Start  11368351
Chromosome Location . End  11371788 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28D6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006533 tba-7 T28D6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28D6.2 T28D6.2 1335   III: 11368434-11368563

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28D6.2.1 11368351 11371788 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105516   213   III: 11368351-11368563 Caenorhabditis elegans
Exon105517   515   III: 11369350-11369864 Caenorhabditis elegans
Exon105518   171   III: 11370795-11370965 Caenorhabditis elegans
Exon105519   302   III: 11371019-11371320 Caenorhabditis elegans
Exon105523   230   III: 11371559-11371788 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28D6.2.1 11368351 11371788 -1

1 Sequence

Length
1431

1 Sequence Ontology Term

Identifier Name Description
transcript