WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47D3B.1 Sequence Name  Y47D3B.1
Length (nt)  1572   Chromosome Location  III: 11382281-11382319
Chromosome . Primary Identifier  III Chromosome Location . Start  11382281
Chromosome Location . End  11382319
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3B.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48290 SUBS-4 60.4 523 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00082264
WBRNAi00056766
WBRNAi00037166
WBRNAi00072733
WBRNAi00074988
WBRNAi00074992
WBRNAi00074995
WBRNAi00066823
WBRNAi00006397
WBRNAi00072734
WBRNAi00072732
WBRNAi00074989
WBRNAi00074991
WBRNAi00074990
WBRNAi00074993
WBRNAi00074994
WBRNAi00108876
WBRNAi00108931
WBRNAi00108986
WBRNAi00109041
WBRNAi00082285
WBRNAi00108821

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47D3B.1 11382281 11382319 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012939 subs-4 Y47D3B.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47D3B.1 11382281 11382319 1
CDS:Y47D3B.1 11382954 11383071 1
CDS:Y47D3B.1 11383122 11383271 1
CDS:Y47D3B.1 11383323 11383440 1
CDS:Y47D3B.1 11383489 11383548 1
CDS:Y47D3B.1 11384719 11385112 1
CDS:Y47D3B.1 11385967 11386153 1
CDS:Y47D3B.1 11387345 11387513 1
CDS:Y47D3B.1 11387566 11387695 1
CDS:Y47D3B.1 11388214 11388340 1
CDS:Y47D3B.1 11388492 11388571 1

1 Sequence

Length
1572

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47D3B.1.1 Y47D3B.1.1 1729   III: 11382222-11388669