WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3B.6.1 Sequence Name  Y47D3B.6.1
Length (nt)  1068   Chromosome Location  III: 11427206-11428414
Chromosome . Primary Identifier  III Chromosome Location . Start  11427206
Chromosome Location . End  11428414 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3B.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012942 idpc-1 Y47D3B.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3B.6 Y47D3B.6 810   III: 11427227-11427284

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3B.6.1 11427206 11428414 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105614   79   III: 11427206-11427284 Caenorhabditis elegans
Exon105615   98   III: 11427379-11427476 Caenorhabditis elegans
Exon105616   891   III: 11427524-11428414 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3B.6.1 11427206 11428414 1

1 Sequence

Length
1068

1 Sequence Ontology Term

Identifier Name Description
transcript