WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47D3B.11 Sequence Name  Y47D3B.11
Length (nt)  1464   Chromosome Location  III: 11456927-11457080
Chromosome . Primary Identifier  III Chromosome Location . Start  11456927
Chromosome Location . End  11457080
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3B.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33946 PLR-1 54.9 487 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00094790
WBRNAi00056768
WBRNAi00037167
WBRNAi00101325

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47D3B.11 11456927 11457080 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023404 plr-1 Y47D3B.11 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47D3B.11 11456927 11457080 1
CDS:Y47D3B.11 11457732 11457820 1
CDS:Y47D3B.11 11459787 11459999 1
CDS:Y47D3B.11 11460791 11461464 1
CDS:Y47D3B.11 11461917 11462168 1
CDS:Y47D3B.11 11462440 11462521 1

1 Sequence

Length
1464

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47D3B.11.1 Y47D3B.11.1 1890   III: 11456877-11462897