WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66A7A.2b.1 Sequence Name  Y66A7A.2b.1
Length (nt)  180   Chromosome Location  III: 11485566-11485802
Chromosome . Primary Identifier  III Chromosome Location . Start  11485566
Chromosome Location . End  11485802 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66A7A.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013422 popl-5 Y66A7A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66A7A.2b Y66A7A.2b 180   III: 11485566-11485666

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66A7A.2b.1 11485566 11485802 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105670   101   III: 11485566-11485666 Caenorhabditis elegans
Exon105671   79   III: 11485724-11485802 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66A7A.2b.1 11485566 11485802 -1

1 Sequence

Length
180

1 Sequence Ontology Term

Identifier Name Description
transcript