WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66D12A.23.1 Sequence Name  Y66D12A.23.1
Length (nt)  1365   Chromosome Location  III: 11488355-11500747
Chromosome . Primary Identifier  III Chromosome Location . Start  11488355
Chromosome Location . End  11500747 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66D12A.23.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013447 nars-2 Y66D12A.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66D12A.23 Y66D12A.23 1257   III: 11488406-11488972

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66D12A.23.1 11488355 11500747 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105676   618   III: 11488355-11488972 Caenorhabditis elegans
Exon105677   112   III: 11490069-11490180 Caenorhabditis elegans
Exon105679   305   III: 11491074-11491378 Caenorhabditis elegans
Exon105681   113   III: 11491668-11491780 Caenorhabditis elegans
Exon105683   178   III: 11492626-11492803 Caenorhabditis elegans
Exon105690   39   III: 11500709-11500747 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66D12A.23.1 11488355 11500747 -1

1 Sequence

Length
1365

1 Sequence Ontology Term

Identifier Name Description
transcript