WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66D12A.13.1 Sequence Name  Y66D12A.13.1
Length (nt)  1664   Chromosome Location  III: 11548370-11552398
Chromosome . Primary Identifier  III Chromosome Location . Start  11548370
Chromosome Location . End  11552398 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66D12A.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013439 Y66D12A.13 Y66D12A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66D12A.13 Y66D12A.13 1602   III: 11548377-11548478

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66D12A.13.1 11548370 11552398 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105760   109   III: 11548370-11548478 Caenorhabditis elegans
Exon105761   327   III: 11549737-11550063 Caenorhabditis elegans
Exon105762   122   III: 11550213-11550334 Caenorhabditis elegans
Exon105763   183   III: 11550383-11550565 Caenorhabditis elegans
Exon105764   249   III: 11550617-11550865 Caenorhabditis elegans
Exon105765   230   III: 11551508-11551737 Caenorhabditis elegans
Exon105766   194   III: 11551901-11552094 Caenorhabditis elegans
Exon105767   250   III: 11552149-11552398 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66D12A.13.1 11548370 11552398 1

1 Sequence

Length
1664

1 Sequence Ontology Term

Identifier Name Description
transcript