WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66D12A.10.1 Sequence Name  Y66D12A.10.1
Length (nt)  861   Chromosome Location  III: 11565874-11568007
Chromosome . Primary Identifier  III Chromosome Location . Start  11565874
Chromosome Location . End  11568007 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66D12A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013436 Y66D12A.10 Y66D12A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66D12A.10 Y66D12A.10 708   III: 11565912-11566051

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66D12A.10.1 11565874 11568007 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105779   178   III: 11565874-11566051 Caenorhabditis elegans
Exon105780   100   III: 11566114-11566213 Caenorhabditis elegans
Exon105781   254   III: 11566265-11566518 Caenorhabditis elegans
Exon105782   69   III: 11566564-11566632 Caenorhabditis elegans
Exon105783   260   III: 11567748-11568007 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66D12A.10.1 11565874 11568007 1

1 Sequence

Length
861

1 Sequence Ontology Term

Identifier Name Description
transcript