WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66A7A.6.1 Sequence Name  Y66A7A.6.1
Length (nt)  1301   Chromosome Location  III: 11625242-11628235
Chromosome . Primary Identifier  III Chromosome Location . Start  11625242
Chromosome Location . End  11628235 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66A7A.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001633 gly-8 Y66A7A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66A7A.6 Y66A7A.6 1266   III: 11625243-11625349

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66A7A.6.1 11625242 11628235 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105852   108   III: 11625242-11625349 Caenorhabditis elegans
Exon105853   79   III: 11625636-11625714 Caenorhabditis elegans
Exon105854   104   III: 11625770-11625873 Caenorhabditis elegans
Exon105855   253   III: 11626396-11626648 Caenorhabditis elegans
Exon105856   134   III: 11626726-11626859 Caenorhabditis elegans
Exon105857   159   III: 11626906-11627064 Caenorhabditis elegans
Exon105858   118   III: 11627112-11627229 Caenorhabditis elegans
Exon105859   153   III: 11627845-11627997 Caenorhabditis elegans
Exon105860   193   III: 11628043-11628235 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66A7A.6.1 11625242 11628235 1

1 Sequence

Length
1301

1 Sequence Ontology Term

Identifier Name Description
transcript