WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66A7A.8.1 Sequence Name  Y66A7A.8.1
Length (nt)  1468   Chromosome Location  III: 11633216-11636840
Chromosome . Primary Identifier  III Chromosome Location . Start  11633216
Chromosome Location . End  11636840 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66A7A.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006552 tbx-33 Y66A7A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66A7A.8 Y66A7A.8 1263   III: 11633406-11633855

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66A7A.8.1 11633216 11636840 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105883   640   III: 11633216-11633855 Caenorhabditis elegans
Exon105884   132   III: 11634932-11635063 Caenorhabditis elegans
Exon105885   349   III: 11635332-11635680 Caenorhabditis elegans
Exon105886   157   III: 11636365-11636521 Caenorhabditis elegans
Exon105887   190   III: 11636651-11636840 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66A7A.8.1 11633216 11636840 -1

1 Sequence

Length
1468

1 Sequence Ontology Term

Identifier Name Description
transcript