WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41C4A.4g.1 Sequence Name  Y41C4A.4g.1
Length (nt)  1615   Chromosome Location  III: 11682962-11693882
Chromosome . Primary Identifier  III Chromosome Location . Start  11682962
Chromosome Location . End  11693882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41C4A.4g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000793 crh-1 Y41C4A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41C4A.4g Y41C4A.4g 1287   III: 11682962-11683428

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41C4A.4g.1 11682962 11693882 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105904   467   III: 11682962-11683428 Caenorhabditis elegans
Exon105910   94   III: 11685210-11685303 Caenorhabditis elegans
Exon105918   205   III: 11688132-11688336 Caenorhabditis elegans
Exon105926   207   III: 11691302-11691508 Caenorhabditis elegans
Exon105933   194   III: 11692481-11692674 Caenorhabditis elegans
Exon105939   448   III: 11693435-11693882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41C4A.4g.1 11682962 11693882 1

1 Sequence

Length
1615

1 Sequence Ontology Term

Identifier Name Description
transcript