WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41C4A.13.1 Sequence Name  Y41C4A.13.1
Length (nt)  646   Chromosome Location  III: 11733345-11737627
Chromosome . Primary Identifier  III Chromosome Location . Start  11733345
Chromosome Location . End  11737627 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41C4A.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012759 sup-1 Y41C4A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41C4A.13 Y41C4A.13 312   III: 11733665-11733757

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41C4A.13.1 11733345 11737627 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106008   413   III: 11733345-11733757 Caenorhabditis elegans
Exon106010   117   III: 11737350-11737466 Caenorhabditis elegans
Exon106011   116   III: 11737512-11737627 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41C4A.13.1 11733345 11737627 -1

1 Sequence

Length
646

1 Sequence Ontology Term

Identifier Name Description
transcript