WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41C4A.12a.1 Sequence Name  Y41C4A.12a.1
Length (nt)  950   Chromosome Location  III: 11724036-11726690
Chromosome . Primary Identifier  III Chromosome Location . Start  11724036
Chromosome Location . End  11726690 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41C4A.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012758 Y41C4A.12 Y41C4A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41C4A.12a Y41C4A.12a 837   III: 11724137-11724189

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41C4A.12a.1 11724036 11726690 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106037   154   III: 11724036-11724189 Caenorhabditis elegans
Exon106039   120   III: 11724238-11724357 Caenorhabditis elegans
Exon106041   94   III: 11724855-11724948 Caenorhabditis elegans
Exon106043   244   III: 11725131-11725374 Caenorhabditis elegans
Exon106045   121   III: 11725664-11725784 Caenorhabditis elegans
Exon106048   217   III: 11726474-11726690 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41C4A.12a.1 11724036 11726690 -1

1 Sequence

Length
950

1 Sequence Ontology Term

Identifier Name Description
transcript