WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41C4A.14.1 Sequence Name  Y41C4A.14.1
Length (nt)  1205   Chromosome Location  III: 11746766-11750175
Chromosome . Primary Identifier  III Chromosome Location . Start  11746766
Chromosome Location . End  11750175 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41C4A.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003417 mrt-2 Y41C4A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41C4A.14 Y41C4A.14 804   III: 11747049-11747147

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41C4A.14.1 11746766 11750175 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106032   197   III: 11746766-11746962 Caenorhabditis elegans
Exon106034   104   III: 11747044-11747147 Caenorhabditis elegans
Exon106035   156   III: 11747219-11747374 Caenorhabditis elegans
Exon106037   141   III: 11747434-11747574 Caenorhabditis elegans
Exon106039   81   III: 11747623-11747703 Caenorhabditis elegans
Exon106041   90   III: 11748886-11748975 Caenorhabditis elegans
Exon106043   120   III: 11749122-11749241 Caenorhabditis elegans
Exon106045   316   III: 11749860-11750175 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41C4A.14.1 11746766 11750175 1

1 Sequence

Length
1205

1 Sequence Ontology Term

Identifier Name Description
transcript