WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:Y56A3A.3.1 Sequence Name  Y56A3A.3.1
Length (nt)  439   Chromosome Location  III: 11848152-11849413
Chromosome . Primary Identifier  III Chromosome Location . Start  11848152
Chromosome Location . End  11849413 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y56A3A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003234 mif-1 Y56A3A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y56A3A.3 Y56A3A.3 354   III: 11848155-11848265

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y56A3A.3.1 11848152 11849413 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106176   114   III: 11848152-11848265 Caenorhabditis elegans
Exon106177   176   III: 11848315-11848490 Caenorhabditis elegans
Exon106178   149   III: 11849265-11849413 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y56A3A.3.1 11848152 11849413 1

1 Sequence

Length
439

1 Sequence Ontology Term

Identifier Name Description
transcript