WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y56A3A.4a Sequence Name  Y56A3A.4a
Length (nt)  1029   Chromosome Location  III: 11862479-11862610
Chromosome . Primary Identifier  III Chromosome Location . Start  11862479
Chromosome Location . End  11862610
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y56A3A.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31842 TAF-12, isoform a 38.2 342 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00113252
WBRNAi00057604
WBRNAi00057605
WBRNAi00073389
WBRNAi00073391
WBRNAi00021082
WBRNAi00113022
WBRNAi00002684
WBRNAi00002752
WBRNAi00037551
WBRNAi00073390
WBRNAi00057603

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y56A3A.4a 11862479 11862610 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006396 taf-12 Y56A3A.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y56A3A.4a 11862479 11862610 -1
CDS:Y56A3A.4a 11863399 11863602 -1
CDS:Y56A3A.4a 11864947 11865132 -1
CDS:Y56A3A.4a 11865625 11865720 -1
CDS:Y56A3A.4a 11866025 11866206 -1
CDS:Y56A3A.4a 11868723 11868855 -1
CDS:Y56A3A.4a 11869179 11869274 -1

1 Sequence

Length
1029

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y56A3A.4a.1 Y56A3A.4a.1 1122   III: 11862393-11869281