WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y56A3A.16b.1 Sequence Name  Y56A3A.16b.1
Length (nt)  2769   Chromosome Location  III: 11910176-11914317
Chromosome . Primary Identifier  III Chromosome Location . Start  11910176
Chromosome Location . End  11914317 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y56A3A.16b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013235 Y56A3A.16 Y56A3A.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y56A3A.16b Y56A3A.16b 1794   III: 11911148-11911453

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y56A3A.16b.1 11910176 11914317 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106270   1278   III: 11910176-11911453 Caenorhabditis elegans
Exon106273   132   III: 11911724-11911855 Caenorhabditis elegans
Exon106275   1139   III: 11912898-11914036 Caenorhabditis elegans
Exon106276   220   III: 11914098-11914317 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y56A3A.16b.1 11910176 11914317 -1

1 Sequence

Length
2769

1 Sequence Ontology Term

Identifier Name Description
transcript