WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y56A3A.17 Sequence Name  Y56A3A.17
Length (nt)  1494   Chromosome Location  III: 11915935-11916072
Chromosome . Primary Identifier  III Chromosome Location . Start  11915935
Chromosome Location . End  11916072
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y56A3A.17

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22585 NPP-16 52.2 497 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00001618
WBRNAi00057576
WBRNAi00057577
WBRNAi00057578
WBRNAi00057579
WBRNAi00021070
WBRNAi00021071
WBRNAi00006881
WBRNAi00007194
WBRNAi00037540
WBRNAi00078421
WBRNAi00069234
WBRNAi00069233
WBRNAi00069235
WBRNAi00062461

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y56A3A.17 11915935 11916072 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003802 npp-16 Y56A3A.17 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y56A3A.17 11915935 11916072 1
CDS:Y56A3A.17 11916130 11916686 1
CDS:Y56A3A.17 11916907 11917404 1
CDS:Y56A3A.17 11917456 11917756 1

1 Sequence

Length
1494

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y56A3A.17.1 Y56A3A.17.1 1618   III: 11915928-11917873