WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y56A3A.28.1 Sequence Name  Y56A3A.28.1
Length (nt)  1438   Chromosome Location  III: 11960867-11971367
Chromosome . Primary Identifier  III Chromosome Location . Start  11960867
Chromosome Location . End  11971367 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y56A3A.28.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013240 Y56A3A.28 Y56A3A.28 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y56A3A.28 Y56A3A.28 1161   III: 11961953-11962205

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y56A3A.28.1 11960867 11971367 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106346   263   III: 11960867-11961129 Caenorhabditis elegans
Exon106348   258   III: 11961948-11962205 Caenorhabditis elegans
Exon106349   326   III: 11963418-11963743 Caenorhabditis elegans
Exon106351   348   III: 11969021-11969368 Caenorhabditis elegans
Exon106353   141   III: 11970369-11970509 Caenorhabditis elegans
Exon106355   102   III: 11971266-11971367 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y56A3A.28.1 11960867 11971367 -1

1 Sequence

Length
1438

1 Sequence Ontology Term

Identifier Name Description
transcript