WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y56A3A.27 Sequence Name  Y56A3A.27
Length (nt)  2280   Chromosome Location  III: 11950018-11950269
Chromosome . Primary Identifier  III Chromosome Location . Start  11950018
Chromosome Location . End  11950269
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y56A3A.27

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28138 TOP-3A 85.4 759 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00065533
WBRNAi00065649
WBRNAi00057592
WBRNAi00065535
WBRNAi00065532
WBRNAi00081545
WBRNAi00065534
WBRNAi00065536
WBRNAi00093805
WBRNAi00093806
WBRNAi00093804
WBRNAi00065531
WBRNAi00081546

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y56A3A.27 11950018 11950269 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006596 top-3A Y56A3A.27 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y56A3A.27 11950018 11950269 -1
CDS:Y56A3A.27 11951157 11951704 -1
CDS:Y56A3A.27 11953301 11953593 -1
CDS:Y56A3A.27 11954504 11954589 -1
CDS:Y56A3A.27 11955610 11956094 -1
CDS:Y56A3A.27 11957172 11957353 -1
CDS:Y56A3A.27 11957432 11957560 -1
CDS:Y56A3A.27 11958550 11958710 -1
CDS:Y56A3A.27 11960025 11960168 -1

1 Sequence

Length
2280

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y56A3A.27.1 Y56A3A.27.1 2392   III: 11949918-11960180