WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y56A3A.29b.1 Sequence Name  Y56A3A.29b.1
Length (nt)  460   Chromosome Location  III: 11971474-11974096
Chromosome . Primary Identifier  III Chromosome Location . Start  11971474
Chromosome Location . End  11974096 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y56A3A.29b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013241 ung-1 Y56A3A.29 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y56A3A.29b Y56A3A.29b 288   III: 11971639-11971739

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y56A3A.29b.1 11971474 11974096 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106358   266   III: 11971474-11971739 Caenorhabditis elegans
Exon106364   128   III: 11973858-11973985 Caenorhabditis elegans
Exon106366   66   III: 11974031-11974096 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y56A3A.29b.1 11971474 11974096 -1

1 Sequence

Length
460

1 Sequence Ontology Term

Identifier Name Description
transcript