WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y56A3A.31c.1 Sequence Name  Y56A3A.31c.1
Length (nt)  1023   Chromosome Location  III: 11983530-11989509
Chromosome . Primary Identifier  III Chromosome Location . Start  11983530
Chromosome Location . End  11989509 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y56A3A.31c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013243 Y56A3A.31 Y56A3A.31 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y56A3A.31c Y56A3A.31c 1023   III: 11983530-11983682

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y56A3A.31c.1 11983530 11989509 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106380   153   III: 11983530-11983682 Caenorhabditis elegans
Exon106384   270   III: 11986408-11986677 Caenorhabditis elegans
Exon106388   340   III: 11987501-11987840 Caenorhabditis elegans
Exon106390   260   III: 11989250-11989509 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y56A3A.31c.1 11983530 11989509 1

1 Sequence

Length
1023

1 Sequence Ontology Term

Identifier Name Description
transcript