WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y56A3A.33.1 Sequence Name  Y56A3A.33.1
Length (nt)  1058   Chromosome Location  III: 11999590-12002950
Chromosome . Primary Identifier  III Chromosome Location . Start  11999590
Chromosome Location . End  12002950 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y56A3A.33.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013244 Y56A3A.33 Y56A3A.33 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y56A3A.33 Y56A3A.33 1029   III: 11999609-11999905

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y56A3A.33.1 11999590 12002950 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106414   316   III: 11999590-11999905 Caenorhabditis elegans
Exon106415   192   III: 12000397-12000588 Caenorhabditis elegans
Exon106416   275   III: 12000953-12001227 Caenorhabditis elegans
Exon106417   183   III: 12002026-12002208 Caenorhabditis elegans
Exon106418   92   III: 12002859-12002950 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y56A3A.33.1 11999590 12002950 -1

1 Sequence

Length
1058

1 Sequence Ontology Term

Identifier Name Description
transcript