WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y79H2A.3b Sequence Name  Y79H2A.3b
Length (nt)  3282   Chromosome Location  III: 12038861-12038980
Chromosome . Primary Identifier  III Chromosome Location . Start  12038861
Chromosome Location . End  12038980
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y79H2A.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43496 Y79H2A.3, isoform b 126.2 1093 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00058527
WBRNAi00026966
WBRNAi00027547
WBRNAi00021498
WBRNAi00006846
WBRNAi00071371

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y79H2A.3b 12038861 12038980 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013580 Y79H2A.3 Y79H2A.3 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y79H2A.3b 12038861 12038980 -1
CDS:Y79H2A.3b 12042595 12042831 -1
CDS:Y79H2A.3b 12043776 12044014 -1
CDS:Y79H2A.3b 12045517 12045988 -1
CDS:Y79H2A.3b 12046093 12046281 -1
CDS:Y79H2A.3b 12047552 12047685 -1
CDS:Y79H2A.3b 12048434 12048584 -1
CDS:Y79H2A.3b 12048635 12048754 -1
CDS:Y79H2A.3b 12048802 12048963 -1
CDS:Y79H2A.3b 12049025 12049104 -1
CDS:Y79H2A.3b 12050059 12050446 -1
CDS:Y79H2A.3b 12050497 12050726 -1
CDS:Y79H2A.3b 12050799 12050922 -1
CDS:Y79H2A.3b 12050981 12051241 -1
CDS:Y79H2A.3b 12051808 12051959 -1
CDS:Y79H2A.3b 12052011 12052116 -1
CDS:Y79H2A.3b 12052177 12052293 -1

1 Sequence

Length
3282

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y79H2A.3b.1 Y79H2A.3b.1 3282   III: 12038861-12052293