WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y79H2A.6a Sequence Name  Y79H2A.6a
Length (nt)  1107   Chromosome Location  III: 12052694-12052714
Chromosome . Primary Identifier  III Chromosome Location . Start  12052694
Chromosome Location . End  12052714
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y79H2A.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24672 ARX-3, isoform a 41.1 368 Caenorhabditis elegans
 

Other

40 RNAi

WormBase ID
WBRNAi00114249
WBRNAi00114092
WBRNAi00114053
WBRNAi00114211
WBRNAi00101885
WBRNAi00058532
WBRNAi00058533
WBRNAi00026967
WBRNAi00027548
WBRNAi00075092
WBRNAi00072783
WBRNAi00021500
WBRNAi00072785
WBRNAi00072784
WBRNAi00101887
WBRNAi00101888
WBRNAi00087684
WBRNAi00037881
WBRNAi00114288
WBRNAi00114132
WBRNAi00080503
WBRNAi00060096
WBRNAi00060097
WBRNAi00075087
WBRNAi00075091
WBRNAi00075086
WBRNAi00075089
WBRNAi00075088
WBRNAi00075093
WBRNAi00000241

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y79H2A.6a 12052694 12052714 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000201 arx-3 Y79H2A.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y79H2A.6a 12052694 12052714 -1
CDS:Y79H2A.6a 12053586 12053676 -1
CDS:Y79H2A.6a 12054549 12054608 -1
CDS:Y79H2A.6a 12054661 12054794 -1
CDS:Y79H2A.6a 12055076 12055162 -1
CDS:Y79H2A.6a 12056913 12057216 -1
CDS:Y79H2A.6a 12057997 12058324 -1
CDS:Y79H2A.6a 12058374 12058455 -1

1 Sequence

Length
1107

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y79H2A.6a.1 Y79H2A.6a.1 1380   III: 12052424-12058458