WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y75B8A.4.1 Sequence Name  Y75B8A.4.1
Length (nt)  2361   Chromosome Location  III: 12107774-12113468
Chromosome . Primary Identifier  III Chromosome Location . Start  12107774
Chromosome Location . End  12113468 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y75B8A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013541 lonp-2 Y75B8A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y75B8A.4 Y75B8A.4 2322   III: 12107785-12107885

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.4.1 12107774 12113468 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106667   112   III: 12107774-12107885 Caenorhabditis elegans
Exon106668   245   III: 12108227-12108471 Caenorhabditis elegans
Exon106669   251   III: 12108786-12109036 Caenorhabditis elegans
Exon106670   147   III: 12109570-12109716 Caenorhabditis elegans
Exon106671   234   III: 12109773-12110006 Caenorhabditis elegans
Exon106672   98   III: 12110060-12110157 Caenorhabditis elegans
Exon106673   355   III: 12111150-12111504 Caenorhabditis elegans
Exon106674   106   III: 12111555-12111660 Caenorhabditis elegans
Exon106675   288   III: 12112549-12112836 Caenorhabditis elegans
Exon106676   299   III: 12112894-12113192 Caenorhabditis elegans
Exon106677   226   III: 12113243-12113468 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.4.1 12107774 12113468 1

1 Sequence

Length
2361

1 Sequence Ontology Term

Identifier Name Description
transcript