WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y75B8A.5.1 Sequence Name  Y75B8A.5.1
Length (nt)  1392   Chromosome Location  III: 12114565-12118481
Chromosome . Primary Identifier  III Chromosome Location . Start  12114565
Chromosome Location . End  12118481 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y75B8A.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013542 lron-12 Y75B8A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y75B8A.5 Y75B8A.5 1197   III: 12114694-12114909

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.5.1 12114565 12118481 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106678   345   III: 12114565-12114909 Caenorhabditis elegans
Exon106679   276   III: 12116108-12116383 Caenorhabditis elegans
Exon106681   144   III: 12116938-12117081 Caenorhabditis elegans
Exon106682   217   III: 12117136-12117352 Caenorhabditis elegans
Exon106683   206   III: 12117727-12117932 Caenorhabditis elegans
Exon106684   204   III: 12118278-12118481 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.5.1 12114565 12118481 -1

1 Sequence

Length
1392

1 Sequence Ontology Term

Identifier Name Description
transcript