WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y75B8A.12.1 Sequence Name  Y75B8A.12.1
Length (nt)  2337   Chromosome Location  III: 12190972-12202537
Chromosome . Primary Identifier  III Chromosome Location . Start  12190972
Chromosome Location . End  12202537 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y75B8A.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003892 osm-12 Y75B8A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y75B8A.12 Y75B8A.12 2166   III: 12191056-12191328

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.12.1 12190972 12202537 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106753   357   III: 12190972-12191328 Caenorhabditis elegans
Exon106755   104   III: 12192435-12192538 Caenorhabditis elegans
Exon106756   110   III: 12192584-12192693 Caenorhabditis elegans
Exon106757   142   III: 12193201-12193342 Caenorhabditis elegans
Exon106758   91   III: 12193412-12193502 Caenorhabditis elegans
Exon106761   415   III: 12197726-12198140 Caenorhabditis elegans
Exon106762   91   III: 12198291-12198381 Caenorhabditis elegans
Exon106763   85   III: 12199259-12199343 Caenorhabditis elegans
Exon106764   438   III: 12199396-12199833 Caenorhabditis elegans
Exon106765   255   III: 12201067-12201321 Caenorhabditis elegans
Exon106766   63   III: 12202002-12202064 Caenorhabditis elegans
Exon106767   186   III: 12202352-12202537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.12.1 12190972 12202537 -1

1 Sequence

Length
2337

1 Sequence Ontology Term

Identifier Name Description
transcript