WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y75B8A.24.2 Sequence Name  Y75B8A.24.2
Length (nt)  6594   Chromosome Location  III: 12251492-12273748
Chromosome . Primary Identifier  III Chromosome Location . Start  12251492
Chromosome Location . End  12273748 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y75B8A.24.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013557 Y75B8A.24 Y75B8A.24 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y75B8A.24 Y75B8A.24 6321   III: 12251697-12251790

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.24.2 12251492 12273748 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106832   299   III: 12251492-12251790 Caenorhabditis elegans
Exon106835   292   III: 12253353-12253644 Caenorhabditis elegans
Exon106837   160   III: 12255532-12255691 Caenorhabditis elegans
Exon106839   368   III: 12256636-12257003 Caenorhabditis elegans
Exon106841   428   III: 12258750-12259177 Caenorhabditis elegans
Exon106843   2807   III: 12259684-12262490 Caenorhabditis elegans
Exon106845   76   III: 12263671-12263746 Caenorhabditis elegans
Exon106847   87   III: 12264025-12264111 Caenorhabditis elegans
Exon106849   107   III: 12264805-12264911 Caenorhabditis elegans
Exon106851   190   III: 12264974-12265163 Caenorhabditis elegans
Exon106853   194   III: 12269652-12269845 Caenorhabditis elegans
Exon106855   889   III: 12270745-12271633 Caenorhabditis elegans
Exon106857   328   III: 12272876-12273203 Caenorhabditis elegans
Exon106859   94   III: 12273277-12273370 Caenorhabditis elegans
Exon106861   144   III: 12273429-12273572 Caenorhabditis elegans
Exon106862   131   III: 12273618-12273748 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.24.2 12251492 12273748 -1

1 Sequence

Length
6594

1 Sequence Ontology Term

Identifier Name Description
transcript