WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y75B8A.32.1 Sequence Name  Y75B8A.32.1
Length (nt)  1553   Chromosome Location  III: 12354898-12358561
Chromosome . Primary Identifier  III Chromosome Location . Start  12354898
Chromosome Location . End  12358561 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y75B8A.32.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013562 Y75B8A.32 Y75B8A.32 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y75B8A.32 Y75B8A.32 1335   III: 12355081-12355332

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.32.1 12354898 12358561 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106979   435   III: 12354898-12355332 Caenorhabditis elegans
Exon106980   321   III: 12356392-12356712 Caenorhabditis elegans
Exon106981   161   III: 12356781-12356941 Caenorhabditis elegans
Exon106982   129   III: 12356985-12357113 Caenorhabditis elegans
Exon106983   63   III: 12357654-12357716 Caenorhabditis elegans
Exon106984   153   III: 12357770-12357922 Caenorhabditis elegans
Exon106985   57   III: 12357968-12358024 Caenorhabditis elegans
Exon106986   64   III: 12358140-12358203 Caenorhabditis elegans
Exon106987   69   III: 12358345-12358413 Caenorhabditis elegans
Exon106988   101   III: 12358461-12358561 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.32.1 12354898 12358561 -1

1 Sequence

Length
1553

1 Sequence Ontology Term

Identifier Name Description
transcript