WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y75B8A.31.1 Sequence Name  Y75B8A.31.1
Length (nt)  1001   Chromosome Location  III: 12351642-12354914
Chromosome . Primary Identifier  III Chromosome Location . Start  12351642
Chromosome Location . End  12354914 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y75B8A.31.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013561 Y75B8A.31 Y75B8A.31 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y75B8A.31 Y75B8A.31 942   III: 12351648-12351824

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.31.1 12351642 12354914 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107022   183   III: 12351642-12351824 Caenorhabditis elegans
Exon107023   264   III: 12351893-12352156 Caenorhabditis elegans
Exon107024   120   III: 12352210-12352329 Caenorhabditis elegans
Exon107025   129   III: 12353669-12353797 Caenorhabditis elegans
Exon107026   135   III: 12354444-12354578 Caenorhabditis elegans
Exon107027   170   III: 12354745-12354914 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.31.1 12351642 12354914 1

1 Sequence

Length
1001

1 Sequence Ontology Term

Identifier Name Description
transcript