WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y49E10.3 Sequence Name  Y49E10.3
Length (nt)  966   Chromosome Location  III: 12374486-12374624
Chromosome . Primary Identifier  III Chromosome Location . Start  12374486
Chromosome Location . End  12374624
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22221 PPH-4.2 36.3 321 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00057023
WBRNAi00023005
WBRNAi00007124
WBRNAi00022669
WBRNAi00037297
WBRNAi00022999
WBRNAi00061695
WBRNAi00084021
WBRNAi00084038
WBRNAi00084023
WBRNAi00084022
WBRNAi00084024
WBRNAi00084026

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y49E10.3 12374486 12374624 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004086 pph-4.2 Y49E10.3 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y49E10.3 12374486 12374624 -1
CDS:Y49E10.3 12375580 12376226 -1
CDS:Y49E10.3 12377019 12377142 -1
CDS:Y49E10.3 12377193 12377248 -1

1 Sequence

Length
966

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y49E10.3.1 Y49E10.3.1 1279   III: 12374173-12377248