WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49E10.10.1 Sequence Name  Y49E10.10.1
Length (nt)  1418   Chromosome Location  III: 12395465-12398943
Chromosome . Primary Identifier  III Chromosome Location . Start  12395465
Chromosome Location . End  12398943 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013033 Y49E10.10 Y49E10.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49E10.10 Y49E10.10 1254   III: 12396057-12396129

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.10.1 12395465 12398943 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107103   89   III: 12395465-12395553 Caenorhabditis elegans
Exon107105   108   III: 12396022-12396129 Caenorhabditis elegans
Exon107106   48   III: 12396178-12396225 Caenorhabditis elegans
Exon107108   300   III: 12396722-12397021 Caenorhabditis elegans
Exon107110   267   III: 12397074-12397340 Caenorhabditis elegans
Exon107112   81   III: 12397397-12397477 Caenorhabditis elegans
Exon107114   99   III: 12397528-12397626 Caenorhabditis elegans
Exon107116   48   III: 12397713-12397760 Caenorhabditis elegans
Exon107118   84   III: 12397810-12397893 Caenorhabditis elegans
Exon107120   109   III: 12397952-12398060 Caenorhabditis elegans
Exon107122   185   III: 12398759-12398943 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.10.1 12395465 12398943 1

1 Sequence

Length
1418

1 Sequence Ontology Term

Identifier Name Description
transcript