WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49E10.17a.1 Sequence Name  Y49E10.17a.1
Length (nt)  309   Chromosome Location  III: 12436515-12437226
Chromosome . Primary Identifier  III Chromosome Location . Start  12436515
Chromosome Location . End  12437226 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.17a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013036 fbxa-218 Y49E10.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49E10.17a Y49E10.17a 117   III: 12436552-12436649

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.17a.1 12436515 12437226 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107168   135   III: 12436515-12436649 Caenorhabditis elegans
Exon107170   174   III: 12437053-12437226 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.17a.1 12436515 12437226 1

1 Sequence

Length
309

1 Sequence Ontology Term

Identifier Name Description
transcript