WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49E10.16b.1 Sequence Name  Y49E10.16b.1
Length (nt)  746   Chromosome Location  III: 12431644-12433853
Chromosome . Primary Identifier  III Chromosome Location . Start  12431644
Chromosome Location . End  12433853 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.16b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013035 Y49E10.16 Y49E10.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49E10.16b Y49E10.16b 654   III: 12431644-12431753

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.16b.1 12431644 12433853 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107209   110   III: 12431644-12431753 Caenorhabditis elegans
Exon107211   387   III: 12432224-12432610 Caenorhabditis elegans
Exon107212   249   III: 12433605-12433853 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.16b.1 12431644 12433853 1

1 Sequence

Length
746

1 Sequence Ontology Term

Identifier Name Description
transcript