WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49E10.27.1 Sequence Name  Y49E10.27.1
Length (nt)  531   Chromosome Location  III: 12434404-12435811
Chromosome . Primary Identifier  III Chromosome Location . Start  12434404
Chromosome Location . End  12435811 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.27.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013045 Y49E10.27 Y49E10.27 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49E10.27 Y49E10.27 417   III: 12434411-12434556

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.27.1 12434404 12435811 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107214   153   III: 12434404-12434556 Caenorhabditis elegans
Exon107215   245   III: 12434881-12435125 Caenorhabditis elegans
Exon107216   133   III: 12435679-12435811 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.27.1 12434404 12435811 1

1 Sequence

Length
531

1 Sequence Ontology Term

Identifier Name Description
transcript