WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49E10.21b.1 Sequence Name  Y49E10.21b.1
Length (nt)  1195   Chromosome Location  III: 12457597-12459335
Chromosome . Primary Identifier  III Chromosome Location . Start  12457597
Chromosome Location . End  12459335 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.21b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013040 Y49E10.21 Y49E10.21 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49E10.21b Y49E10.21b 1164   III: 12457599-12457673

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.21b.1 12457597 12459335 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107211   77   III: 12457597-12457673 Caenorhabditis elegans
Exon107214   251   III: 12457731-12457981 Caenorhabditis elegans
Exon107216   595   III: 12458031-12458625 Caenorhabditis elegans
Exon107218   272   III: 12459064-12459335 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.21b.1 12457597 12459335 1

1 Sequence

Length
1195

1 Sequence Ontology Term

Identifier Name Description
transcript