WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49E10.24.1 Sequence Name  Y49E10.24.1
Length (nt)  1341   Chromosome Location  III: 12484732-12488341
Chromosome . Primary Identifier  III Chromosome Location . Start  12484732
Chromosome Location . End  12488341 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.24.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013043 arrd-16 Y49E10.24 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49E10.24 Y49E10.24 1200   III: 12484794-12484898

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.24.1 12484732 12488341 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107256   167   III: 12484732-12484898 Caenorhabditis elegans
Exon107257   444   III: 12485655-12486098 Caenorhabditis elegans
Exon107258   90   III: 12486395-12486484 Caenorhabditis elegans
Exon107259   145   III: 12486529-12486673 Caenorhabditis elegans
Exon107260   290   III: 12486726-12487015 Caenorhabditis elegans
Exon107261   205   III: 12488137-12488341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.24.1 12484732 12488341 1

1 Sequence

Length
1341

1 Sequence Ontology Term

Identifier Name Description
transcript