WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.2.1 Sequence Name  Y111B2A.2.1
Length (nt)  300   Chromosome Location  III: 12496086-12496430
Chromosome . Primary Identifier  III Chromosome Location . Start  12496086
Chromosome Location . End  12496430 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013728 Y111B2A.2 Y111B2A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.2 Y111B2A.2 261   III: 12496088-12496224

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.2.1 12496086 12496430 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107276   139   III: 12496086-12496224 Caenorhabditis elegans
Exon107277   161   III: 12496270-12496430 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.2.1 12496086 12496430 1

1 Sequence

Length
300

1 Sequence Ontology Term

Identifier Name Description
transcript