WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.10b.2 Sequence Name  Y111B2A.10b.2
Length (nt)  1545   Chromosome Location  III: 12595996-12598585
Chromosome . Primary Identifier  III Chromosome Location . Start  12595996
Chromosome Location . End  12598585 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.10b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013734 gldi-8 Y111B2A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.10b Y111B2A.10b 939   III: 12596145-12596381

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.10b.2 12595996 12598585 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107406   386   III: 12595996-12596381 Caenorhabditis elegans
Exon107410   1000   III: 12597166-12598165 Caenorhabditis elegans
Exon107414   159   III: 12598427-12598585 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.10b.2 12595996 12598585 -1

1 Sequence

Length
1545

1 Sequence Ontology Term

Identifier Name Description
transcript